2VDK (resolution: 2.80 Å)

ID Name Organism Chains bound to carbohydrates
1 Integrin alpha-IIb
P08514 (ITA2B_HUMAN)
HOMO SAPIENS 1 chain bound to carbohydrates
Chain A:
3 glycosylation head interfaces
3 glycosylation body interfaces
2 N-glycosylations
2 Integrin beta-3
P05106 (ITB3_HUMAN)
HOMO SAPIENS 1 chain bound to carbohydrates
Chain B:
3 glycosylation head interfaces
3 glycosylation body interfaces
3 N-glycosylations
3 MONOCLONAL ANTIBODY 10E5 HEAVY CHAIN
Heavy chain subclass: IGHV14
MUS MUSCULUS 0 chain bound to carbohydrates
4 MONOCLONAL ANTIBODY 10E5 LIGHT CHAIN
Light chain subclass: IGKV14 (Kappa)
MUS MUSCULUS 0 chain bound to carbohydrates

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
5 α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]α-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 4 (1 molecule) A, B
6 α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]α-D-mannopyranose-(1-6)-[α-D-mannopyranose-(1-3)]α-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 3 (1 molecule) B
9 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 3 (3 molecules) A, B

Binding sites


Related structures