3ZDZ (resolution: 2.75 Å)

ID Name Organism Chains bound to carbohydrates
1 Integrin alpha-IIb
P08514 (ITA2B_HUMAN)
HOMO SAPIENS 2 chains bound to carbohydrates
Chain A:
1 glycosylation head interface
3 glycosylation body interfaces
Chain C:
1 glycosylation head interface
4 glycosylation body interfaces
2 Integrin beta-3
P05106 (ITB3_HUMAN)
HOMO SAPIENS 2 chains bound to carbohydrates
Chain B:
3 glycosylation head interfaces
2 glycosylation body interfaces
3 N-glycosylations
Chain D:
3 glycosylation head interfaces
2 glycosylation body interfaces
3 N-glycosylations
3 10E5 FAB HEAVY CHAIN
Heavy chain subclass: IGHV14
MUS MUSCULUS 0 chain bound to carbohydrates
4 10E5 FAB LIGHT CHAIN
Light chain subclass: IGKV14 (Kappa)
MUS MUSCULUS 0 chain bound to carbohydrates
5 RGD PEPTIDE HOMO SAPIENS 0 chain bound to carbohydrates

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
6 α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 5 (1 molecule) A, B, C
7 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 4 (2 molecules) B, D
8 α-D-mannopyranose-(1-3)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 4 (1 molecule) C, D
12 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 2 (2 molecules) B, D

Binding sites


Related structures