3QUY (resolution: 2.25 Å)

ID Name Organism Chains bound to carbohydrates
1 Antigen-presenting glycoprotein CD1d1
P11609 (CD1D1_MOUSE)
Mus musculus 1 chain bound to carbohydrates
Chain A:
1 binding site
3 glycosylation head interfaces
2 glycosylation body interfaces
3 N-glycosylations
2 Beta-2-microglobulin
P01887 (B2MG_MOUSE)
Mus musculus 0 chain bound to carbohydrates
3 Valpha14 (mouse variable domain, human constant domain) Mus musculus 1 chain bound to carbohydrates
Chain C:
1 binding site
4 Vbeta8.2 (mouse variable domain, human constant domain) Mus musculus 0 chain bound to carbohydrates

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains Binding affinity
5 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-[α-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-β-D-glucopyranose 3 (1 molecule) A
6 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 2 (2 molecules) A
7 (2S + 3r + 4S + 5r + 6S)-6-[(2S + 3S + 4r)-2-(hexacosanoylamino)-3 + 4-dihydroxy-octadecoxy]-3 + 4 + 5-trihydroxy-N-(phenylmethyl)oxane-2-carboxamide 1 (1 molecule) A, C Kd=187nM (MOAD)

Binding sites


Related structures


Bound to carbohydrates
Without carbohydrates