6CW6 (resolution: 2.85 Å)

ID Name Organism Chains bound to carbohydrates
1 Antigen-presenting glycoprotein CD1d1
P11609 (CD1D1_MOUSE)
Mus musculus 1 chain bound to carbohydrates
Chain A:
1 binding site
3 glycosylation head interfaces
2 glycosylation body interfaces
3 N-glycosylations
2 Beta-2-microglobulin
P01887 (B2MG_MOUSE)
Mus musculus 0 chain bound to carbohydrates
3 Human nkt tcr alpha chain
K7N5M3 (K7N5M3_HUMAN)
Mus musculus 1 chain bound to carbohydrates
Chain C:
1 binding site
4 Human nkt tcr beta chain
K7N5M4 (K7N5M4_HUMAN)
Mus musculus 0 chain bound to carbohydrates

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
5 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-[α-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-β-D-glucopyranose 3 (1 molecule) A
6 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 2 (2 molecules) A
7 (2S + 3S + 4r)-N-octanoyl-1-[(α-D-galactopyranosyl)oxy]-2-amino-octadecane-3 + 4-diol 1 (1 molecule) A, C

Binding sites


Related structures


Bound to carbohydrates
Without carbohydrates