4ZAK (resolution: 2.82 Å)

ID Name Organism Chains bound to carbohydrates
1 Antigen-presenting glycoprotein CD1d1
P11609 (CD1D1_MOUSE)
Mus musculus 1 chain bound to carbohydrates
Chain A:
1 binding site
3 glycosylation head interfaces
1 glycosylation body interface
3 N-glycosylations
2 Beta-2-microglobulin
P01887 (B2MG_MOUSE)
Mus musculus 0 chain bound to carbohydrates
3 Protein Trav11,Va14Ja18/Vb8.2,Human nkt tcr alpha chain
K7N5M3, A0A0B4J1J9, A0A0G2JG46
Mus musculus 1 chain bound to carbohydrates
Chain C:
1 binding site
4 T cell antigen receptor beta chain 8.2,T-cell receptor beta-2 chain C region,Protein Trbc2,T-cell receptor beta-2 chain C region
A2NTY6, A0N8J3, A0A5B9
Mus musculus 0 chain bound to carbohydrates

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
5 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 2 (1 molecule) A
6 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 2 (2 molecules) A
7 N-[(2S + 3S + 4r)-1-(α-D-galactopyranosyloxy)-3 + 4-dihydroxyoctadecan-2-yl]hexacosanethioamide 1 (1 molecule) A, C

Binding sites


Related structures


Bound to carbohydrates
Without carbohydrates