3SDC (resolution: 3.10 Å)

ID Name Organism Chains bound to carbohydrates
1 Antigen-presenting glycoprotein CD1d1
P11609 (CD1D1_MOUSE)
Mus musculus 1 chain bound to carbohydrates
Chain A:
3 binding sites
3 glycosylation head interfaces
1 glycosylation body interface
3 N-glycosylations
2 Beta-2-microglobulin
P01887 (B2MG_MOUSE)
Mus musculus 0 chain bound to carbohydrates
3 T cell receptor alpha chain constant
P01848 (TRAC_HUMAN)
Mus musculus , Homo sapiens 1 chain bound to carbohydrates
Chain C:
3 binding sites
4 NKT TCR autoreactive-Vbeta6 chain Mus musculus , Homo sapiens 0 chain bound to carbohydrates

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
5 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 2 (1 molecule) A
6 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 2 (2 molecules) A
7 N-[(2S + 3r + 4e)-1-{[α-D-galactopyranosyl-(1->4)-β-D-galactopyranosyl-(1->4)-β-D-glucopyranosyl]oxy}-3-hydroxyoctadec-4-en-2-yl]hexacosanamide 3 (1 molecule) A, C

Binding sites


Related structures


Bound to carbohydrates
Without carbohydrates