5TW5 (resolution: 1.85 Å)

ID Name Organism Chains bound to carbohydrates
1 Antigen-presenting glycoprotein CD1d1
P11609 (CD1D1_MOUSE)
Mus musculus 1 chain bound to carbohydrates
Chain A:
1 binding site
3 glycosylation head interfaces
1 glycosylation body interface
3 N-glycosylations
2 Beta-2-microglobulin
P01887 (B2MG_MOUSE)
Mus musculus 0 chain bound to carbohydrates

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains Binding affinity
3 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 2 (1 molecule) A
5 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 2 (2 molecules) A
6 N-[(2S + 3S + 4r)-1-(α-D-galactopyranosyloxy)-3 + 4-dihydroxy-16-phenylhexadecan-2-yl]octanamide 1 (1 molecule) A -logKd/Ki=7.42, Kd=38.1nM (PDBbind-CN)

Binding sites


Related structures


Bound to carbohydrates
Without carbohydrates