6XCM (resolution: 3.42 Å)

ID Name Organism Chains bound to carbohydrates
1 Spike glycoprotein
P0DTC2 (SPIKE_SARS2)
Severe acute respiratory syndrome coronavirus 2 3 chains bound to carbohydrates
Chain A:
16 glycosylation head interfaces
4 glycosylation body interfaces
14 N-glycosylations
Chain B:
18 glycosylation head interfaces
5 glycosylation body interfaces
15 N-glycosylations
1 unassigned-glycosylation
Chain C:
16 glycosylation head interfaces
6 glycosylation body interfaces
14 N-glycosylations
1 unassigned-glycosylation
2 C105 Fab Heavy Chain
Heavy chain subclass: IGHV3
Homo sapiens 0 chain bound to carbohydrates
3 C105 Fab Light Chain
Light chain subclass: IGLV2 (Lambda)
Homo sapiens 0 chain bound to carbohydrates

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
4 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 18 (9 molecules) A, B, C
5 α-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-β-D-glucopyranose 2 (1 molecule) A
6 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-[α-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-β-D-glucopyranose 6 (2 molecules) B, C
7 il-7racdw127 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 2 (1 molecule) C
8 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 30 (30 molecules) A, B, C

Binding sites


Related structures


Bound to carbohydrates
Without carbohydrates