7N8H (resolution: 2.30 Å)

ID Name Organism Chains bound to carbohydrates
1 Spike glycoprotein
P0DTC2 (SPIKE_SARS2)
Severe acute respiratory syndrome coronavirus 2 3 chains bound to carbohydrates
Chain A:
19 glycosylation head interfaces
4 glycosylation body interfaces
16 N-glycosylations
Chain F:
19 glycosylation head interfaces
4 glycosylation body interfaces
16 N-glycosylations
Chain K:
19 glycosylation head interfaces
4 glycosylation body interfaces
16 N-glycosylations
2 S2M11 Fab Light Chain variable region
Light chain subclass: IGKV3 (Kappa)
Homo sapiens 3 chains bound to carbohydrates
Chain B [auth D]:
1 glycosylation head interface
1 glycosylation body interface
Chain G:
1 glycosylation head interface
1 glycosylation body interface
Chain L:
1 glycosylation head interface
1 glycosylation body interface
3 S2M11 Fab Heavy Chain variable region
Heavy chain subclass: IGHV1
Homo sapiens 3 chains bound to carbohydrates
Chain C [auth E]:
1 glycosylation head interface
1 glycosylation body interface
Chain H:
1 glycosylation head interface
1 glycosylation body interface
Chain M:
1 glycosylation head interface
1 glycosylation body interface
4 S2L20 Fab Light Chain variable region
Light chain subclass: IGKV1 (Kappa)
Homo sapiens 0 chain bound to carbohydrates
5 S2L20 Fab Heavy Chain variable region
Heavy chain subclass: IGHV3
Homo sapiens 3 chains bound to carbohydrates
Chain E [auth C]:
2 glycosylation head interfaces
Chain J:
2 glycosylation head interfaces
Chain O:
2 glycosylation head interfaces

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
6 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-[α-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-β-D-glucopyranose 9 (3 molecules) A, B, C, F, G, H, K, L, M
[auth A,D,E,F,G,H,K,L,M]
7 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 12 (6 molecules) A, F, K
8 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 39 (39 molecules) A, E, F, J, K, O
[auth A,C,F,J,K,O]

Binding sites


Related structures


Bound to carbohydrates
Without carbohydrates