7M6I (resolution: 4.00 Å)

ID Name Organism Chains bound to carbohydrates
1 Spike glycoprotein
P0DTC2 (SPIKE_SARS2)
Severe acute respiratory syndrome coronavirus 2 3 chains bound to carbohydrates
Chain A:
1 binding site
13 glycosylation head interfaces
1 glycosylation body interface
11 N-glycosylations
Chain B:
1 binding site
13 glycosylation head interfaces
2 glycosylation body interfaces
9 N-glycosylations
Chain C:
1 binding site
11 glycosylation head interfaces
2 glycosylation body interfaces
9 N-glycosylations
2 BG1-24 Fab Heavy Chain
Heavy chain subclass: IGHV1
Homo sapiens 1 chain bound to carbohydrates
Chain D [auth H]:
2 glycosylation body interfaces
3 BG1-24 Fab Light Chain
Light chain subclass: IGKV3 (Kappa)
Homo sapiens 0 chain bound to carbohydrates

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
4 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 6 (3 molecules) A, B, C
5 α-D-mannopyranose-(1-3)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 4 (1 molecule) B, D
[auth B,H]
6 il-7racdw127 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 2 (1 molecule) B, C
7 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 26 (26 molecules) A, B, C

Binding sites


Related structures


Bound to carbohydrates
Without carbohydrates