6XEY (resolution: 3.25 Å)

ID Name Organism Chains bound to carbohydrates
1 Spike glycoprotein
P0DTC2 (SPIKE_SARS2)
Severe acute respiratory syndrome coronavirus 2 3 chains bound to carbohydrates
Chain A:
19 glycosylation head interfaces
5 glycosylation body interfaces
15 N-glycosylations
Chain B:
19 glycosylation head interfaces
5 glycosylation body interfaces
15 N-glycosylations
Chain C:
18 glycosylation head interfaces
5 glycosylation body interfaces
15 N-glycosylations
2 2-4 Heavy Chain
Heavy chain subclass: IGHV1
Homo sapiens 3 chains bound to carbohydrates
Chain D [auth F]:
1 glycosylation head interface
2 glycosylation body interfaces
1 N-glycosylation
Chain F [auth H]:
1 glycosylation head interface
2 glycosylation body interfaces
1 N-glycosylation
Chain G [auth J]:
1 glycosylation head interface
2 glycosylation body interfaces
1 N-glycosylation
3 IGH + IGL c137_light_IGLV2-8_IGLJ2
A0A5C2GJG2 (A0A5C2GJG2_HUMAN)
Light chain subclass: IGLV2 (Lambda)
Homo sapiens 3 chains bound to carbohydrates
Chain E [auth G]:
1 glycosylation head interface
2 glycosylation body interfaces
Chain H [auth K]:
1 glycosylation head interface
2 glycosylation body interfaces
Chain I [auth L]:
1 glycosylation head interface
2 glycosylation body interfaces

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
4 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 14 (7 molecules) A, B, C, D, E, F, G, H, I
[auth A,B,C,F,G,H,J,K,L]
5 il-7racdw127 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 9 (3 molecules) A, B, C, D, E, F, G, H, I
[auth A,B,C,F,G,H,J,K,L]
6 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 4 (2 molecules) B, C
7 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 36 (36 molecules) A, B, C

Binding sites


Related structures


Bound to carbohydrates
Without carbohydrates