7BEP (resolution: 2.61 Å)

ID Name Organism Chains bound to carbohydrates
1 Spike glycoprotein
P0DTC2 (SPIKE_SARS2)
Severe acute respiratory syndrome coronavirus 2 2 chains bound to carbohydrates
Chain A [auth E]:
1 glycosylation head interface
2 glycosylation body interfaces
1 N-glycosylation
Chain F [auth C]:
1 glycosylation head interface
2 glycosylation body interfaces
1 N-glycosylation
2 COVOX-384 heavy chain
Heavy chain subclass: IGHV3
Homo sapiens 0 chain bound to carbohydrates
3 COVOX-384 light chain
Light chain subclass: IGKV1 (Kappa)
Homo sapiens 0 chain bound to carbohydrates
4 S309 heavy chain
Heavy chain subclass: IGHV1
Homo sapiens 2 chains bound to carbohydrates
Chain D [auth H]:
1 glycosylation head interface
2 glycosylation body interfaces
Chain I [auth G]:
1 glycosylation head interface
2 glycosylation body interfaces
5 S309 light chain
Light chain subclass: IGKV3 (Kappa)
Homo sapiens 2 chains bound to carbohydrates
Chain E [auth L]:
1 glycosylation head interface
4 glycosylation body interfaces
Chain J [auth I]:
1 glycosylation head interface
4 glycosylation body interfaces

Chain properties


Carbohydrates


ID Description N° of binding sites Bound to chains
6 α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-[α-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-β-D-glucopyranose 12 (2 molecules) A, D, E, F, I, J
[auth C,E,G,H,I,L]

Binding sites


Related structures


Bound to carbohydrates
Without carbohydrates