7KKK (resolution: 3.03 Å)

ID Name Organism Chains bound to carbohydrates
1 Spike glycoprotein
P0DTC2 (SPIKE_SARS2)
Severe acute respiratory syndrome coronavirus 2 3 chains bound to carbohydrates
Chain A:
16 glycosylation head interfaces
5 glycosylation body interfaces
14 N-glycosylations
Chain C:
16 glycosylation head interfaces
5 glycosylation body interfaces
14 N-glycosylations
Chain E:
16 glycosylation head interfaces
5 glycosylation body interfaces
14 N-glycosylations
2 Synthetic nanobody Nb6
Heavy chain subclass: IGHV1
synthetic construct 0 chain bound to carbohydrates

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
3 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 24 (12 molecules) A, C, E
4 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 30 (30 molecules) A, C, E

Binding sites


Related structures


Bound to carbohydrates
Without carbohydrates