8CYA (resolution: 2.70 Å)

ID Name Organism Chains bound to carbohydrates
1 Spike glycoprotein
P0DTC2 (SPIKE_SARS2)
Severe acute respiratory syndrome coronavirus 2 3 chains bound to carbohydrates
Chain A [auth B]:
9 binding sites
15 glycosylation head interfaces
6 glycosylation body interfaces
11 N-glycosylations
Chain B [auth A]:
14 binding sites
10 glycosylation head interfaces
3 glycosylation body interfaces
7 N-glycosylations
Chain C:
14 binding sites
10 glycosylation head interfaces
7 glycosylation body interfaces
8 N-glycosylations
2 pan-sarbecovirus nanobody 2-67
Heavy chain subclass: IGHV1
Lama glama 0 chain bound to carbohydrates

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
3 il-7racdw127 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 28 (14 molecules) A, B, C
4 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 6 (4 molecules) A, B, C
5 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-[α-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-β-D-glucopyranose 6 (2 molecules) A, B, C
6 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 32 (32 molecules) A, B, C

Binding sites


Related structures


Bound to carbohydrates
Without carbohydrates