7ORA (resolution: 2.60 Å)

ID Name Organism Chains bound to carbohydrates
1 Spike glycoprotein
P0DTC2 (SPIKE_SARS2)
Severe acute respiratory syndrome coronavirus 2 2 chains bound to carbohydrates
Chain A [auth R]:
1 glycosylation head interface
1 glycosylation body interface
1 N-glycosylation
Chain F [auth C]:
1 glycosylation head interface
3 glycosylation body interfaces
1 N-glycosylation
2 COVOX-45 Fab heavy chain
Heavy chain subclass: IGHV3
Homo sapiens 0 chain bound to carbohydrates
3 COVOX-45 Fab light chain
Light chain subclass: IGKV1 (Kappa)
Homo sapiens 0 chain bound to carbohydrates
4 COVOX-253 Fab heavy chain
Heavy chain subclass: IGHV1
Homo sapiens 2 chains bound to carbohydrates
Chain D [auth F]:
1 glycosylation head interface
2 glycosylation body interfaces
1 N-glycosylation
Chain I [auth H]:
1 glycosylation head interface
2 glycosylation body interfaces
1 N-glycosylation
5 COVOX-253 Fab light chain
Light chain subclass: IGKV3 (Kappa)
Homo sapiens 1 chain bound to carbohydrates
Chain E [auth G]:
1 glycosylation body interface

Chain properties


Carbohydrates


ID Description N° of binding sites Bound to chains
6 α-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-β-D-glucopyranose 2 (1 molecule) A
[auth R]
7 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-[α-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-β-D-glucopyranose 9 (3 molecules) D, E, F, I
[auth C,F,G,H]

Binding sites


Related structures


Bound to carbohydrates
Without carbohydrates