7RBV (resolution: 3.60 Å)

ID Name Organism Chains bound to carbohydrates
1 PVI.V6-14 Fab light chain, variable region
Light chain subclass: IGKV1 (Kappa)
Homo sapiens 1 chain bound to carbohydrates
Chain D [auth L]:
1 glycosylation head interface
2 PVI.V6-14 Fab heavy chain, variable region
Heavy chain subclass: IGHV4
Homo sapiens 0 chain bound to carbohydrates
3 Spike glycoprotein
P0DTC2 (SPIKE_SARS2)
Severe acute respiratory syndrome coronavirus 2 3 chains bound to carbohydrates
Chain C [auth A]:
18 glycosylation head interfaces
11 glycosylation body interfaces
16 N-glycosylations
Chain F [auth B]:
19 glycosylation head interfaces
11 glycosylation body interfaces
16 N-glycosylations
Chain G [auth C]:
19 glycosylation head interfaces
11 glycosylation body interfaces
16 N-glycosylations

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
4 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 30 (15 molecules) C, F, G
[auth A,B,C]
5 α-D-mannopyranose-(1-4)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 6 (3 molecules) C, F, G
[auth A,B,C]
6 α-D-mannopyranose-(1-3)-α-D-mannopyranose-(1-6)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 6 (3 molecules) C, F, G
[auth A,B,C]
7 α-D-mannopyranose-(1-6)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 15 (6 molecules) C, F, G
[auth A,B,C]
8 il-7racdw127 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 6 (3 molecules) C, F, G
[auth A,B,C]
9 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 18 (18 molecules) C, D, F, G
[auth A,B,C,L]

Binding sites


Related structures


Bound to carbohydrates
Without carbohydrates