7KKL (resolution: 2.85 Å)

ID Name Organism Chains bound to carbohydrates
1 Spike glycoprotein
P0DTC2 (SPIKE_SARS2)
Severe acute respiratory syndrome coronavirus 2 3 chains bound to carbohydrates
Chain A:
18 glycosylation head interfaces
6 glycosylation body interfaces
15 N-glycosylations
Chain C:
18 glycosylation head interfaces
6 glycosylation body interfaces
15 N-glycosylations
Chain E [auth D]:
18 glycosylation head interfaces
6 glycosylation body interfaces
15 N-glycosylations
2 Synthetic nanobody mNb6
Heavy chain subclass: IGHV1
synthetic construct 3 chains bound to carbohydrates
Chain B:
1 glycosylation head interface
1 glycosylation body interface
Chain D [auth E]:
1 glycosylation head interface
1 glycosylation body interface
Chain F:
1 glycosylation head interface

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
3 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 36 (18 molecules) A, B, C, D, E, F
4 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 27 (27 molecules) A, C, E
[auth A,C,D]

Binding sites


Related structures


Bound to carbohydrates
Without carbohydrates