7XOD (resolution: 3.27 Å)

ID Name Organism Chains bound to carbohydrates
1 Spike glycoprotein
P0DTC2 (SPIKE_SARS2)
Severe acute respiratory syndrome coronavirus 2 3 chains bound to carbohydrates
Chain A:
15 glycosylation head interfaces
1 glycosylation body interface
12 N-glycosylations
Chain B:
16 glycosylation head interfaces
1 glycosylation body interface
13 N-glycosylations
Chain C:
15 glycosylation head interfaces
12 N-glycosylations
2 Heavy chain of JMB2002 Fab
Heavy chain subclass: IGHV1
Homo sapiens 0 chain bound to carbohydrates
3 Light chain of JMB2002 Fab
Light chain subclass: IGKV1 (Kappa)
Homo sapiens 0 chain bound to carbohydrates
4 Nanobody
Heavy chain subclass: IGHV1
Lama glama 0 chain bound to carbohydrates

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
5 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 4 (2 molecules) A, B
6 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 35 (35 molecules) A, B, C

Binding sites


Related structures


Bound to carbohydrates
Without carbohydrates