8CSJ (resolution: 3.53 Å)

ID Name Organism Chains bound to carbohydrates
1 Spike glycoprotein
P0DTC2 (SPIKE_SARS2)
Severe acute respiratory syndrome coronavirus 2 3 chains bound to carbohydrates
Chain A:
2 binding sites
18 glycosylation head interfaces
1 glycosylation body interface
13 N-glycosylations
1 unassigned-glycosylation
Chain D [auth B]:
16 glycosylation head interfaces
1 glycosylation body interface
12 N-glycosylations
Chain E [auth C]:
17 glycosylation head interfaces
3 glycosylation body interfaces
13 N-glycosylations
2 4-33 heavy chain
Heavy chain subclass: IGHV7
Homo sapiens 3 chains bound to carbohydrates
Chain B [auth H]:
1 glycosylation head interface
Chain F [auth D]:
1 glycosylation head interface
Chain H [auth F]:
1 glycosylation head interface
3 4-33 light chain
Light chain subclass: IGLV1 (Lambda)
Homo sapiens 0 chain bound to carbohydrates

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
4 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 10 (5 molecules) A, D, E
[auth A,B,C]
5 2-acetamido-2-deoxy-β-D-glucopyranose-(2-3)-2-acetamido-2-deoxy-β-D-glucopyranose 2 (1 molecule) D, E
[auth B,C]
6 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 33 (33 molecules) A, B, D, E, F, H
[auth A,B,C,D,F,H]

Binding sites


Related structures


Bound to carbohydrates
Without carbohydrates