7LY3 (resolution: 3.00 Å)

ID Name Organism Chains bound to carbohydrates
1 Spike glycoprotein
P0DTC2 (SPIKE_SARS2)
Severe acute respiratory syndrome coronavirus 2 2 chains bound to carbohydrates
Chain A:
7 glycosylation head interfaces
8 glycosylation body interfaces
7 N-glycosylations
Chain B:
7 glycosylation head interfaces
6 glycosylation body interfaces
7 N-glycosylations
2 S2M28 Fab Heavy Chain
Heavy chain subclass: IGHV3
Homo sapiens 2 chains bound to carbohydrates
Chain C [auth D]:
1 glycosylation head interface
2 glycosylation body interfaces
Chain F:
1 glycosylation head interface
3 glycosylation body interfaces
3 S2M28 Fab Light Chain
Light chain subclass: IGLV3 (Lambda)
Homo sapiens 0 chain bound to carbohydrates

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
4 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-[α-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-β-D-glucopyranose 9 (3 molecules) A, B, C
[auth A,B,D]
5 α-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-β-D-glucopyranose 8 (4 molecules) A, B
6 α-D-mannopyranose-(1-6)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-[α-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-β-D-glucopyranose 7 (2 molecules) A, B, F
7 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 5 (5 molecules) A, B

Binding sites


Related structures


Bound to carbohydrates
Without carbohydrates