7ND4 (resolution: 3.60 Å)

ID Name Organism Chains bound to carbohydrates
1 Spike glycoprotein
P0DTC2 (SPIKE_SARS2)
Severe acute respiratory syndrome coronavirus 2 3 chains bound to carbohydrates
Chain A:
20 glycosylation head interfaces
7 glycosylation body interfaces
15 N-glycosylations
Chain B:
20 glycosylation head interfaces
7 glycosylation body interfaces
15 N-glycosylations
Chain C:
20 glycosylation head interfaces
8 glycosylation body interfaces
15 N-glycosylations
2 COVOX-88 Fab heavy chain
Heavy chain subclass: IGHV4
Homo sapiens 3 chains bound to carbohydrates
Chain D [auth H]:
1 glycosylation head interface
1 glycosylation body interface
1 N-glycosylation
Chain F [auth D]:
1 glycosylation head interface
1 glycosylation body interface
1 N-glycosylation
Chain H [auth F]:
1 glycosylation head interface
1 glycosylation body interface
1 N-glycosylation
3 COVOX-88 Fab light chain
Light chain subclass: IGLV1 (Lambda)
Homo sapiens 3 chains bound to carbohydrates
Chain E [auth L]:
1 glycosylation head interface
3 glycosylation body interfaces
Chain G [auth E]:
1 glycosylation head interface
2 glycosylation body interfaces
Chain I [auth G]:
1 glycosylation head interface
2 glycosylation body interfaces

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
4 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 30 (15 molecules) A, B, C
5 α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 5 (1 molecule) C, D, E
[auth C,H,L]
6 il-7racdw127 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 6 (2 molecules) A, B, F, G, H, I
[auth A,B,D,E,F,G]
7 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 30 (30 molecules) A, B, C

Binding sites


Related structures


Bound to carbohydrates
Without carbohydrates