7UPY (resolution: 3.10 Å)

ID Name Organism Chains bound to carbohydrates
1 Spike glycoprotein
P0DTC2 (SPIKE_SARS2)
Severe acute respiratory syndrome coronavirus 3 chains bound to carbohydrates
Chain A:
23 glycosylation head interfaces
14 glycosylation body interfaces
19 N-glycosylations
Chain B:
24 glycosylation head interfaces
15 glycosylation body interfaces
19 N-glycosylations
Chain C:
25 glycosylation head interfaces
14 glycosylation body interfaces
19 N-glycosylations
2 SP1-77 Fab heavy chain
Heavy chain subclass: IGHV1
Homo sapiens 3 chains bound to carbohydrates
Chain D [auth H]:
2 glycosylation head interfaces
5 glycosylation body interfaces
Chain F [auth D]:
2 glycosylation head interfaces
5 glycosylation body interfaces
Chain H [auth F]:
1 glycosylation head interface
2 glycosylation body interfaces
3 SP1-77 Fab light chain
Light chain subclass: IGKV1 (Kappa)
Homo sapiens 3 chains bound to carbohydrates
Chain E [auth L]:
1 glycosylation body interface
Chain G [auth E]:
1 glycosylation body interface
Chain I [auth G]:
1 glycosylation body interface

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
4 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 32 (16 molecules) A, B, C
5 α-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 28 (12 molecules) A, B, C, D, F, H
6 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-[α-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-β-D-glucopyranose 18 (6 molecules) A, B, C, D, E, F, G, H, I
[auth A,B,C,D,E,F,G,H,L]
7 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 22 (22 molecules) A, B, C

Binding sites


Related structures


Bound to carbohydrates
Without carbohydrates