7LY2 (resolution: 2.50 Å)

ID Name Organism Chains bound to carbohydrates
1 Spike glycoprotein
P0DTC2 (SPIKE_SARS2)
Severe acute respiratory syndrome coronavirus 2 3 chains bound to carbohydrates
Chain A:
20 glycosylation head interfaces
4 glycosylation body interfaces
18 N-glycosylations
Chain F [auth B]:
21 glycosylation head interfaces
4 glycosylation body interfaces
18 N-glycosylations
Chain K [auth J]:
21 glycosylation head interfaces
4 glycosylation body interfaces
18 N-glycosylations
2 S2M11 Fab Light Chain variable region
Light chain subclass: IGKV3 (Kappa)
Homo sapiens 3 chains bound to carbohydrates
Chain B [auth D]:
1 glycosylation head interface
3 glycosylation body interfaces
Chain G [auth C]:
1 glycosylation head interface
3 glycosylation body interfaces
Chain L [auth K]:
1 glycosylation head interface
3 glycosylation body interfaces
3 S2M11 Fab Heavy Chain variable region
Heavy chain subclass: IGHV1
Homo sapiens 3 chains bound to carbohydrates
Chain C [auth E]:
1 glycosylation head interface
1 glycosylation body interface
Chain H [auth F]:
1 glycosylation head interface
1 glycosylation body interface
Chain M:
1 glycosylation head interface
1 glycosylation body interface
4 S2M28 Fab Heavy Chain variable region
Heavy chain subclass: IGHV3
Homo sapiens 3 chains bound to carbohydrates
Chain D [auth H]:
1 glycosylation head interface
Chain I [auth G]:
1 glycosylation head interface
Chain N:
1 glycosylation head interface
5 S2M28 Fab Light Chain variable region
Light chain subclass: IGLV3 (Lambda)
Homo sapiens 0 chain bound to carbohydrates

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
6 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-[α-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-β-D-glucopyranose 12 (3 molecules) A, B, C, F, G, H, K, L, M
[auth A,B,C,D,E,F,J,K,M]
7 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 12 (6 molecules) A, F, K
[auth A,B,J]
8 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 45 (45 molecules) A, D, F, I, K, N
[auth A,B,G,H,J,N]

Binding sites


Related structures


Bound to carbohydrates
Without carbohydrates