6XR8 (resolution: 2.90 Å)

ID Name Organism Chains bound to carbohydrates
1 Spike glycoprotein
P0DTC2 (SPIKE_SARS2)
Severe acute respiratory syndrome coronavirus 2 3 chains bound to carbohydrates
Chain A:
15 binding sites
15 glycosylation head interfaces
9 glycosylation body interfaces
11 N-glycosylations
Chain B:
5 binding sites
22 glycosylation head interfaces
13 glycosylation body interfaces
17 N-glycosylations
Chain C:
25 glycosylation head interfaces
15 glycosylation body interfaces
19 N-glycosylations

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
2 α-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 45 (21 molecules) A, B, C
3 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 18 (9 molecules) A, B, C
4 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-[α-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-β-D-glucopyranose 9 (3 molecules) A, B, C
5 α-D-mannopyranose-(1-3)-α-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 6 (3 molecules) A, B, C
6 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 20 (20 molecules) A, B, C

Binding sites


Related structures


Bound to carbohydrates
Without carbohydrates