7K9H (resolution: 3.20 Å)

ID Name Organism Chains bound to carbohydrates
1 Spike glycoprotein
P0DTC2 (SPIKE_SARS2)
Severe acute respiratory syndrome coronavirus 2 3 chains bound to carbohydrates
Chain A:
16 glycosylation head interfaces
14 glycosylation body interfaces
14 N-glycosylations
Chain B:
18 glycosylation head interfaces
14 glycosylation body interfaces
15 N-glycosylations
Chain C:
18 glycosylation head interfaces
17 glycosylation body interfaces
15 N-glycosylations
2 2B04 heavy chain
Heavy chain subclass: IGHV2
Mus musculus 1 chain bound to carbohydrates
Chain D [auth H]:
1 glycosylation body interface
3 2B04 light chain
Light chain subclass: IGLV1 (Lambda)
Mus musculus 1 chain bound to carbohydrates
Chain G [auth M]:
1 glycosylation body interface

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
4 il-7racdw127 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 30 (14 molecules) A, B, C, D, G
[auth A,B,C,H,M]
5 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 42 (21 molecules) A, B, C
6 α-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-β-D-glucopyranose 6 (3 molecules) A, B, C
7 α-D-mannopyranose-(1-6)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 8 (3 molecules) A, B, C
8 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 2 (2 molecules) B, C

Binding sites


Related structures


Bound to carbohydrates
Without carbohydrates