7R8O (resolution: 3.50 Å)

ID Name Organism Chains bound to carbohydrates
1 Spike glycoprotein
P0DTC2 (SPIKE_SARS2)
Severe acute respiratory syndrome coronavirus 2 3 chains bound to carbohydrates
Chain A:
12 glycosylation head interfaces
6 glycosylation body interfaces
11 N-glycosylations
Chain B:
14 glycosylation head interfaces
8 glycosylation body interfaces
12 N-glycosylations
Chain C [auth E]:
3 binding sites
10 glycosylation head interfaces
3 glycosylation body interfaces
8 N-glycosylations
2 C548 Fab Heavy Chain
Heavy chain subclass: IGHV1
Homo sapiens 3 chains bound to carbohydrates
Chain D [auth H]:
1 glycosylation head interface
4 glycosylation body interfaces
Chain F [auth M]:
1 glycosylation head interface
2 glycosylation body interfaces
Chain H [auth O]:
1 glycosylation head interface
3 glycosylation body interfaces
3 C548 Fab Light Chain
Light chain subclass: IGLV9 (Lambda)
Homo sapiens 0 chain bound to carbohydrates

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
4 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 10 (5 molecules) A, B
5 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-[α-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-β-D-glucopyranose 3 (1 molecule) A, C, F
[auth A,E,M]
6 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-[α-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-β-D-glucopyranose 4 (1 molecule) A, B, H
[auth A,B,O]
7 α-D-mannopyranose-(1-6)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-[α-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-β-D-glucopyranose 5 (1 molecule) B, C, D
[auth B,E,H]
8 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 26 (26 molecules) A, B, C
[auth A,B,E]

Binding sites


Related structures


Bound to carbohydrates
Without carbohydrates