7KMK (resolution: 4.20 Å)

ID Name Organism Chains bound to carbohydrates
1 Spike glycoprotein
P0DTC2 (SPIKE_SARS2)
Severe acute respiratory syndrome coronavirus 2 3 chains bound to carbohydrates
Chain A:
13 glycosylation head interfaces
3 glycosylation body interfaces
10 N-glycosylations
Chain B:
14 glycosylation head interfaces
4 glycosylation body interfaces
12 N-glycosylations
Chain C:
14 glycosylation head interfaces
3 glycosylation body interfaces
12 N-glycosylations
2 Fab 15033-7 light chain
Light chain subclass: IGKV1 (Kappa)
Homo sapiens 0 chain bound to carbohydrates
3 Fab 15033-7 heavy chain
Heavy chain subclass: IGHV3
Homo sapiens 0 chain bound to carbohydrates

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
4 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 14 (7 molecules) A, B, C
5 il-7racdw127 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 4 (2 molecules) A, B
6 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 25 (25 molecules) A, B, C

Binding sites


Related structures


Bound to carbohydrates
Without carbohydrates