7UPW (resolution: 2.70 Å)

ID Name Organism Chains bound to carbohydrates
1 Spike glycoprotein
P0DTC2 (SPIKE_SARS2)
Severe acute respiratory syndrome coronavirus 3 chains bound to carbohydrates
Chain A:
25 glycosylation head interfaces
17 glycosylation body interfaces
19 N-glycosylations
Chain B:
25 glycosylation head interfaces
18 glycosylation body interfaces
19 N-glycosylations
Chain C:
26 glycosylation head interfaces
17 glycosylation body interfaces
19 N-glycosylations
2 SP1-77 Fab heavy chain
Heavy chain subclass: IGHV1
Homo sapiens 3 chains bound to carbohydrates
Chain D:
2 glycosylation head interfaces
5 glycosylation body interfaces
Chain F:
2 glycosylation head interfaces
6 glycosylation body interfaces
Chain H:
2 glycosylation head interfaces
5 glycosylation body interfaces
3 SP1-77 Fab light chain
Light chain subclass: IGKV1 (Kappa)
Homo sapiens 3 chains bound to carbohydrates
Chain E:
1 glycosylation body interface
Chain G:
1 glycosylation body interface
Chain I [auth L]:
1 glycosylation body interface

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
4 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 12 (6 molecules) A, B, C
5 α-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 57 (24 molecules) A, B, C, D, F, H
6 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-[α-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-β-D-glucopyranose 18 (6 molecules) A, B, C, D, E, F, G, H, I
[auth A,B,C,D,E,F,G,H,L]
7 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 20 (20 molecules) A, B, C

Binding sites


Related structures


Bound to carbohydrates
Without carbohydrates