7SO9 (resolution: 2.40 Å)

ID Name Organism Chains bound to carbohydrates
1 Spike glycoprotein
P0DTC2 (SPIKE_SARS2)
Severe acute respiratory syndrome coronavirus 2 3 chains bound to carbohydrates
Chain A:
18 glycosylation head interfaces
1 glycosylation body interface
16 N-glycosylations
Chain F:
18 glycosylation head interfaces
1 glycosylation body interface
16 N-glycosylations
Chain K:
18 glycosylation head interfaces
1 glycosylation body interface
16 N-glycosylations
2 S2M11 Fab light chain
Light chain subclass: IGKV3 (Kappa)
Homo sapiens 3 chains bound to carbohydrates
Chain B [auth D]:
1 glycosylation head interface
Chain G:
1 glycosylation head interface
Chain L:
1 glycosylation head interface
3 S2M11 Fab heavy chain
Heavy chain subclass: IGHV1
Homo sapiens 3 chains bound to carbohydrates
Chain C [auth E]:
1 glycosylation head interface
1 glycosylation body interface
Chain H:
1 glycosylation head interface
1 glycosylation body interface
Chain M:
1 glycosylation head interface
1 glycosylation body interface
4 S2L20 Fab light chain
Light chain subclass: IGKV1 (Kappa)
Homo sapiens 3 chains bound to carbohydrates
Chain D [auth B]:
1 glycosylation head interface
Chain I:
1 glycosylation head interface
Chain N:
1 glycosylation head interface
5 S2L20 Fab heavy chain
Heavy chain subclass: IGHV3
Homo sapiens 3 chains bound to carbohydrates
Chain E [auth C]:
2 glycosylation head interfaces
Chain J:
2 glycosylation head interfaces
Chain O:
2 glycosylation head interfaces

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
6 α-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-β-D-glucopyranose 6 (3 molecules) A, B, C, F, G, H, K, L, M
[auth A,D,E,F,G,H,K,L,M]
7 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 45 (45 molecules) A, D, E, F, I, J, K, N, O
[auth A,B,C,F,I,J,K,N,O]

Binding sites


Related structures


Bound to carbohydrates
Without carbohydrates